Data standards

The data standards define the format, accuracy, quality and range of the information on the dynamic genetic conservation units (GCUs) of forest trees that has been entered into the EUFGIS Information System. GCU and POPULATION information has been provided by the national focal points. For GENETIC, MODELLED, PHENOTYPIC and FORESTS the information has been produced by the FORGENIUS project. For ENVIRONMENTAL the climatic information has been obtained automatically from the CHELSA and WorldClim2 databases, site information from the EU-DEM Copernicus Land Monitoring Service (25-meter resolution dataset), data on vegetation from MODIS and in addition to external sources, some of the information comes from the FORGENIUS project.

Forest

# Global Identifier Alias Description Data type Level
1 geo_shape_rate_broadleaf broadlea Broad Leaf Forest (%)

Geoometry percentage of broadleaf forest.

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decimals 2
N/A
2 geo_shape_rate_conifer conifer Conifer Forest (%)

Geoometry percentage of conifer forest.

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decimals 2
N/A
3 geo_shape_rate_forest-mix mixed Mixed Forest (%)

Geoometry percentage of mixed forest.

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decimals 2
N/A
4 geo_shape_rate_sclerophyllous scleroph Sclerophyllous Vegetation (%)

Geoometry percentage of sclerophyllous vegetation.

float

decimals 2
N/A
5 geo_shape_rate_trans-wood-shrub transit Transitional Woodland-shrubland (%)

Geoometry percentage of transitional woodland-shrubland vegetation.

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decimals 2
N/A
6 geo_shape_rate_other-natural othernatlc Other Natural Areas (%)

Geoometry percentage of other natural areas.

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decimals 2
N/A
7 geo_shape_rate_agriculture agriareas Agricultural Areas (%)

Geoometry percentage of agricultural areas.

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decimals 2
N/A
8 geo_shape_rate_artificial artifsurf Artificial Surfaces (%)

Geoometry percentage of artificial surfaces.

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decimals 2
N/A
9 geo_shape_rate_other-land otherlc Other Land Cover (%)

Geoometry percentage of other land cover.

float

decimals 2
N/A
10 geo_shape_rate_natura2k percna2k Natura 2K (%)

Geoometry percentage of Natura 2K.

float

decimals 2
N/A
11 chr_AvBiomass AvBiomass Average GCU Biomass

Above-ground biomass af all species (tree, shrubs, annuals)

More

Above ground biomass for the whole GCU, to describe the state of the vegetation. The above ground biomasse (in t/ha) includes all of the vegetation present and in forest and makes it possible to quantitatively consider the importance of wood in forests.

 

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decimals 2
2
12 chr_StdBiomass GCU Biomass standard deviation

Standard deviation of above-ground biomass af all species (tree, shrubs, annuals)

More

Standard deviation of above ground biomass for the whole GCU, or for the current shape, to describe the state of the vegetation. The above ground biomasse (in t/ha) includes all of the vegetation present and in forest and makes it possible to quantitatively consider the importance of wood in forests.

 

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decimals 2
2
13 chr_trend_AvBiomass TrendAvBiomass Trend (temporal dynamics) in Average GCU Biomass

Temporal trends of the above-ground biomass of all species

More

Biomass annual trends in above ground biomass for the whole GCU, to define and quantify whether the forest can be considered a carbon sink (increase in biomass) or a carbon source (decrease in biomass). The above ground biomasse (in t/ha) includes all of the vegetation present and in forest makes it possible to quantitatively consider the importance of wood.

 

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decimals 2
2
14 chr_ForestStructure ForestStructure GCU forest structure

Forest stand structure of the GCU assessed visually

More

Forest stand structure assessed by eye at the GCU level:

- chr_ForestStructure_1: tree crowns inside a single horizontal stratum

- chr_ForestStructure_2: tree crowns contained inside multiple horizontal strata

- chr_ForestStructure_3: stand composed of scattered tree crowns

 

1 = Single layer
2 = Multiple layered
3 = Sparsed forest stand
Only one choice possible

2
15 chr_ForestComposition ForestComposition GCU forest composition

Tree composition of the GCU assessed visually

More

Composition of the forest stand assessed by eye:

- chr_ForestComposition_1: single species

- chr_ForestComposition_1: mixed forest

 

1 = Single species
2 = Mixed forest
Only one choice possible

2
16 chr_AvTreeHeight AvTreeHeight Average GCU tree height

Average tree height of the GCU.

More

Remotely sensed average tree height in the GCU (for all tree species in present in the GCU) in meters. The value come from the beam of the GEDI lidar falling inside the GCU area defined with the polygon (shapefile) of GCU boundaries. If the polygon is not available, the beam falling if a 5km buffer around the coordinate of the GCU is taken.

 

float

decimals 2
N/A
17 chr_AvCanopyHeight Av_canopy_height Average GCU canopy height

Averaged canopy height over the polygon in meters.

More

Remotely sensed averaged to canopy length (m) of the GCU. The value come from the beam of the GEDI lidar falling inside the GCU area defined with the polygon (shapefile) of GCU boundaries. If the polygon is not available, the beam falling if a 5km buffer around the coordinate of the GCU is taken.

 

float

decimals 2
N/A
18 chr_CircBreastHeight CBH Breast height trunk circumference

Circumference of the trunk at breash height (1.30 m).

More

A measure of tree size, circumference of the trunk at breath height (1.30 m) in cm measured with circular tape. Tree level data.

 

float

decimals 2
N/A
19 chr_AvCircBreastHeight Mean.cbh Trunk circumference mean

Mean trunk circumference measured at breast height in a representative circular plot within the GCU (only for trees of circumference > 23.6 cm)

More

The mean of the values of trunk circumference measured at breast height (1.3 m) for all individual trees measured in a circular plot of 15 m radius, representative for the entire GCU. Only trees with circumference > 23.6 cm (DBH > 7.5 cm) are measured.

 

float

decimals 2
2
20 chr_VarCircBreastHeight Var.cbh Trunk circumference variance

Variance of the trunk circumference measured at breast height in a representative circular plot within the GCU (only for trees of circumference > 23.6 cm)

More

The variance of the values of trunk circumference measured at breast height (1.3 m) for all individual trees measured in a circular plot of 15 m radius, representative for the entire GCU. Only trees with circumference > 23.6 cm (DBH > 7.5 cm) are measured.

 

float

decimals 2
2
21 chr_CircBreastHeight_CI95 CI.cbh Breast height trunk circumference 95% confidence interval

95% confidence interval for circumference of the trunk at breash height.

More

Difference between circumference of the trunk at breash height mean and the upper or lower bounds of the 95% confidence interval.

 

float

decimals 2
N/A
22 chr_CircBreastHeight_DBH Diameter at breast height class

The class for the diameter at breast height (DBH) of the trunk, which is used to distinguish a new recruit of a given tree.

DBH-1 = Trunks with diameter smaller than 120 mm.
DBH-2 = Trunks with diameter larger than 120 mm.
Only one choice possible

N/A
23 chr_CrownLength CrownLength Crown length

The lenght of the crown is calculated by substracting basal crown height from total height of the tree.

More

Together with crown projection, crown length can be used to calculate crown volume, and index of the photosynthetic leaf area of the tree.

 

float

decimals 2
N/A
24 chr_AvCrownLength AvCrownLength Crown length mean

The mean of the crown lenght across all measured trees

More

The mean of the values of the crown lenght across 10 measured adult dominant or co-dominant trees sampled either inside or in the vicinity of the representative circular plot with a radius of 15 m. The crown lenght is calculated from the [total height] value subtracted from the [Basal crown height] value. It corresponds to the healthy and functional green crown envelope lenght.

 

float

decimals 1
2
25 chr_VarCrownLength VarCrownLength Crown length variance

The variance of the crown lenght across all measured trees

#Diversity
More

The variance of the values of the crown lenght across 10 measured adult dominant or co-dominant trees sampled either inside or in the vicinity of the representative circular plot with a radius of 15 m. The crown lenght is calculated from the [total height] value subtracted from the [Basal crown height] value. It corresponds to the healthy and functional green crown envelope lenght.

 

float

decimals 1
2
26 chr_AvCrownHeight AvCrownHeight Basal crown height mean

The mean of the vertical distance from ground level to the lowermost point on the main stem where the tree crown starts across all measured trees

More

The mean of the values of height of the base of the tree crown across 10 individual adult dominant/co-dominant trees sampled either inside or in the vicinity of the circular plot with a radius of 15 m, which is representative of the GCU.

The tree crown corresponds to the healthy and functional green crown envelope. Different criteria have to be taken into account: sanitary and continuity between the lower and upper branches. So that, the base of the tree crown could correspond to the first living branch or could start upper of the first living branch.

 

float

decimals 1
2
27 chr_VarCrownHeight Var.Hcrown Basal crown height variance

The variance of the vertical distance from ground level to the lowermost point on the main stem where the tree crown starts across all measured trees

More

The variance of the values of height of the base of the tree crown across 10 individual adult dominant/co-dominant trees sampled either inside or in the vicinity of the circular plot with a radius of 15 m, which is representative of the GCU.

The tree crown corresponds to the healthy and functional green crown envelope. Different criteria have to be taken into account: sanitary and continuity between the lower and upper branches. So that, the base of the tree crown could correspond to the first living branch or could start upper of the first living branch.

 

float

decimals 1
2
28 chr_CrownHeight hbc Basal crown height

The vertical tree height from ground level to the lowermost live branches on the main stem across all measured trees.

float

decimals 2
N/A
29 chr_AvBasalArea AvBasalArea Basal area mean

The mean of the basal area per ha across all measured trees, whether living or dead

More

The mean of the trunk cross-sectional area per hectar (10000 m2) of all living and dead trees measured at breast height (1.3 m). All tree species in the GCU confunded.

 

float

decimals 1
2
30 chr_VarBasalArea VarBasalArea Basal area variance

The variance of the basal area across all measured trees, whether living or dead

More

Variance of the trunk cross-sectional area per hectar (10000 m2) of all living and dead trees measured at breast height (1.3 m). All tree species in the GCU confunded.

 

float

decimals 1
2
31 chr_PlotBasalArea PlotBasalArea Total basal area

Total basal area of living or dead trees inside the representative circular plot, for all species in the plot

More

The sum of the cross-sectional areas measured at breast height of all trees, all species combined, inside a circular plot of 15 m radius, which is representative of the GCU (for all individual trees with circumference > 23.6 cm). The plot is placed around the tree having the reading from the Bitterlisch relascope closest to the mean.

 

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decimals 1
2
32 chr_MedDeadTrees MedDeadTrees Presence of dead trees median

Median of the presence of dead trees in the GCU

#Vulnerability
More

Median of the presence of dead trees inside and around the circular plot with a radius of 15 m, which is representative of the GCU, where 0 means that there are no dead trees and 1 that there are dead trees for the target species.

 

float

decimals 2
1
33 chr_MedNaturalRegeneration MedNaturalRegeneration Abundance of natural regeneration median

Median of the abundance of natural regeneration for the target species of the GCU assessed around all measured trees

#Vulnerability
More

Median of the abundance of natural regeneration assessed around 10 trees inside or around the circular plot with a radius of 15 m, which is representative of the GCU, where 0 means absence of natural regeneration, 1 means scattered regeneration, 2 regeneration in groups and 3 abundant regeneration.

 

float

decimals 2
1
34 chr_TreeSocialStatus TreeSocialStatus Genomic Subset

Social status of each tree.

More

Do = dominant tree

Co = codominant tree

de = dominated tree

See the WP2 protocol for more informations

 

Do = Dominant tree
Co = Co-dominant tree
de = Dominated tree
Only one choice possible

N/A
35 chr_AvTreeAge AvTreeAge Mean tree age

Mean age of the trees belonging to the target species

float

decimals 1
2
36 chr_Htot Htot Total tree height

Vertical tree height from ground level to the upmost tip.

More

A measure of tree size, tree total height in m is measured with a clinometer (Vertex).

 

float

decimals 2
N/A
37 chr_VarHtot Var.Htot Tree height variance

The variance of the vertical tree height across all measured trees

More

Variance of the values of tree height for 10 measured adult dominant or co-dominant trees sampled either inside or in the vicinity of the representative circular plot with a radius of 15 m. The tree height corresponds to the total vertical tree height from ground level to the upmost tip.

 

float

decimals 1
2
38 chr_AvBasalCrownHeight AvHcrown Basal crown height mean

The mean of the vertical tree height from ground level to the lowermost live branch on the main stem across all measured trees.

More

The mean of the values of basal crown height for 10 individual adult dominant/co-dominant trees sampled either inside or outside the circular plot. Stand level data.

 

float

decimals 2
N/A
39 chr_VarBasalCrownHeight VarHcrown Basal crown height variance

The variance of the vertical tree height from ground level to the lowermost live branch on the main stem across all measured trees.

More

Squared standard deviation across all the values of basal crown height. Stand level data.

 

float

decimals 2
N/A
40 chr_MedDieback MedDieback Dieback mean

The median of the dieback index across all measured trees

#Vulnerability
More

The median of the values of the dieback index across 10 measured adult dominant or co-dominant trees sampled either inside or in the vicinity of the representative circular plot with a radius of 15 m. The dieback index corresponds to the state of health of the trees determined by assessing foliage loss according to four classes:

0: 0 to 25% of defoliation

1: 25 to 50% of defoliation

2: 50 to 75 % of defoliation

3: 75% to 99% of defoliation

The value 100% corresponds to a dead tree.

 

float

decimals 2
1
41 chr_IqrDieback IqrDieback Dieback InterQuartile Range

The InterQuartile Range of the dieback index across all measured trees

#Vulnerability
More

The InterQuartile Range of the values of the dieback index across 10 measured adult dominant or co-dominant trees sampled either inside or in the vicinity of the representative circular plot with a radius of 15 m. The dieback index corresponds to the state of health of the trees determined by assessing foliage loss according to four classes:

0: 0 to 25% of defoliation

1: 25 to 50% of defoliation

2: 50 to 75 % of defoliation

3: 75% to 99% of defoliation

The value 100% corresponds to a dead tree.

 

float

decimals 2
1
42 chr_RootingDepth RD Rooting depth

The depth at which the deepest roots can be found

More

Rooting depth is the depth beyond which there are no roots inside the auger or inside the pit. Rooting depth was generally measured by extracting soil samples down to 1 m depth from five cores taken with a soil auger inside the circular plot with a radius of 15 m, which is representative for the GCU. However, in situations when soil petrosity was very high and using the auger proved impossible, a pit was dug.

 

number

2